Hello everyone.
I would like to calculate electronic coupling for PTCDI dimers. I did some calculation and got results that coupling between S1 states are very high numbers (2000-3000 cm^-1). In my system there is a double hydrogen bond, and I thought this might be a reason. And I did another calculation for pentacene dimer. Again the same situation. Then I looked at the example calculations on the manual for water cluster: in the output file attached there, there are coupling values of even several Hartrees. I would assume that this couldn’t be correct, right?.
Could anybody please help with this problem? Maybe I cannot interpret these results correctly, or something else.
Thank you in advance.
$molecule
0 1
--PTCDI 0
0 1
H 3.480049 0.704292 6.522990
H 3.398402 -1.249604 6.522990
H -3.158075 3.445305 6.522990
H 3.546431 3.163756 6.522990
H -3.446002 -3.424048 6.522990
H 3.257632 -3.706081 6.522990
H 0.330469 6.545219 6.522990
H -0.230910 -6.805995 6.522990
O -1.983489 5.684252 6.522990
O -2.464167 -5.753373 6.522990
O 2.563722 5.492612 6.522990
O 2.083046 -5.945014 6.522990
N 0.288182 5.529975 6.522990
N -0.188150 -5.791619 6.522990
C 0.110916 1.303158 6.522990
C -0.010002 -1.564328 6.522990
C -1.167823 0.657362 6.522990
C -1.229136 -0.812648 6.522990
C 1.330049 0.551481 6.522990
C 1.268259 -0.917650 6.522990
C 0.170400 2.732398 6.522990
C -0.069963 -2.992675 6.522990
C -1.029713 3.490935 6.522990
C 1.430504 3.387439 6.522990
C -1.329591 -3.648599 6.522990
C 1.130150 -3.751227 6.522990
C -2.317525 1.448837 6.522990
C -2.441493 -1.505536 6.522990
C 2.541920 1.245253 6.522990
C 2.417566 -1.710480 6.522990
C -2.252980 2.845569 6.522990
C 2.594825 2.642503 6.522990
C -2.494397 -2.902795 6.522990
C 2.353021 -3.107213 6.522990
C -0.989822 4.973237 6.522990
C -1.413839 -5.128738 6.522990
C 1.514282 4.868460 6.522990
C 1.089380 -5.234013 6.522990
H -3.297957 0.989317 6.522990
H -3.379604 -0.964580 6.522990
--PTCDI 1
0 1
H 1.895809 14.932566 6.522990
H 1.814162 12.978670 6.522990
H -4.742315 17.673579 6.522990
H 1.962191 17.392030 6.522990
H -5.030242 10.804225 6.522990
H 1.673392 10.522192 6.522990
H -1.253771 20.773493 6.522990
H -1.815150 7.422278 6.522990
O -3.567729 19.912526 6.522990
O -4.048407 8.474900 6.522990
O 0.979482 19.720885 6.522990
O 0.498806 8.283260 6.522990
N -1.296058 19.758248 6.522990
N -1.772390 8.436655 6.522990
C -1.473324 15.531431 6.522990
C -1.594242 12.663946 6.522990
C -2.752063 14.885635 6.522990
C -2.813376 13.415626 6.522990
C -0.254191 14.779754 6.522990
C -0.315981 13.310624 6.522990
C -1.413840 16.960671 6.522990
C -1.654203 11.235598 6.522990
C -2.613953 17.719209 6.522990
C -0.153736 17.615712 6.522990
C -2.913831 10.579675 6.522990
C -0.454090 10.477046 6.522990
C -3.901765 15.677110 6.522990
C -4.025733 12.722737 6.522990
C 0.957681 15.473526 6.522990
C 0.833326 12.517793 6.522990
C -3.837220 17.073843 6.522990
C 1.010585 16.870777 6.522990
C -4.078636 11.325478 6.522990
C 0.768781 11.121060 6.522990
C -2.574062 19.201510 6.522990
C -2.998078 9.099536 6.522990
C -0.069957 19.096733 6.522990
C -0.494860 8.994261 6.522990
H -4.882197 15.217591 6.522990
H -4.963844 13.263693 6.522990
$end
$rem
BASIS 6-31G*
EXCHANGE B3LYP
IQMOL_FCHK FALSE
CIS_N_ROOTS 1
CIS_TRIPLETS FALSE
AIFDEM_CTSTATES TRUE
AIFDEM TRUE
AIFDEM_EMBED_RANGE FULL_QM
AIFDEM_NTOTHRESH 99
NTO_PAIRS 1
MEM_TOTAL 40000
$end
Here I used FULL_QM, and pretty big system. I have another example for just water dimer, which gave the same high coupling values:
$molecule
0 1
--H2O 0
0 1
O 1.74078 1.59716 -1.49814
H 2.22908 2.18316 -2.08914
H 0.88038 2.04726 -1.32684
--H2O 1
0 1
O 1.388768 -1.849704 -1.917340
H 1.568668 -0.890104 -1.890440
H 1.759368 -2.186304 -1.077040
$end
$rem
BASIS 6-31G*
METHOD wB97X-D
CIS_N_ROOTS 3
CIS_TRIPLETS FALSE
AIFDEM TRUE
AIFDEM_EMBED_RANGE FULL_QM
AIFDEM_NTOTHRESH 90
NTO_PAIRS 1
MEM_TOTAL 8000
$end
I am referring off-diagonal elements. For example, say, matrix element [2,3] is -0.0369144, which is strangely high coupling between S1 states of this molecules.
Not sure. But please note that these are nonorthogonal basis functions so the couplings may be larger than what you are used to seeing in an orthogonal basis.